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Sequence read archive

💡 Words with a Similar Meaning to "Sequence read archive"

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WordDefinition
refseqThe Reference Sequence (RefSeq) database is an open access, annotated and curated collection of publicly available nucleotide sequences and their protein products.
computational genomicsComputational genomics refers to the use of computational and statistical analysis to decipher biology from genome sequences and related data, including both DNA and RNA sequence as well as other "post-genomic" data (i.e., experimental data obtained with technologies that require the genome sequence, such as genomic DNA microarrays).
microrna sequencingMicroRNA sequencing (miRNA-seq), a type of RNA-Seq, is the use of next-generation sequencing or massively parallel high-throughput DNA sequencing to sequence microRNAs, also called miRNAs.
accession numbernounThe unique number given to each new acquisition as it is entered into the catalogue of a library or museum.
genbankThe GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their protein translations.
genotyping by sequencingIn the field of genetic sequencing, genotyping by sequencing, also called GBS, is a method to discover single nucleotide polymorphisms in order to perform genotyping studies, such as genome-wide association studies.
cite-seq(Cellular Indexing of Transcriptomes and Epitopes by Sequencing) a method for performing RNA sequencing along with gaining quantitative and qualitative information on surface proteins with available antibodies on a single cell level.
dna databaseA DNA database or DNA databank is a database of DNA profiles which can be used in the analysis of genetic diseases, genetic fingerprinting for criminology, or genetic genealogy.
blastnounA violent gust of wind (in windy weather) or apparent wind (around a moving vehicle).
binary alignment mapthe comprehensive raw data of genome sequencing; it consists of the lossless, compressed binary representation of the Sequence Alignment Map-files.
genome projectGenome projects are scientific endeavours that ultimately aim to determine the complete genome sequence of an organism (be it an animal, a plant, a fungus, a bacterium, an archaean, a protist or a virus) and to annotate protein-coding genes and other important genome-encoded features.
gene expression omnibusa database for gene expression profiling and RNA methylation profiling managed by the National Center for Biotechnology Information.
genecardsa database of human genes that provides genomic, proteomic, transcriptomic, genetic and functional information on all known and predicted human genes.
single cell sequencing—
stringnoun(countable, uncountable) A long, thin and flexible structure made from threads twisted together.
general feature formatIn bioinformatics, the general feature format (gene-finding format, generic feature format, GFF) is a file format used for describing genes and other features of DNA, RNA and protein sequences.
chia-petChromatin Interaction Analysis by Paired-End Tag Sequencing (ChIA-PET or ChIA-PETS) is a technique that incorporates chromatin immunoprecipitation (ChIP)-based enrichment, chromatin proximity ligation, Paired-End Tags, and High-throughput sequencing to determine de novo long-range chromatin interactions genome-wide.
starr-seq(short for self-transcribing active regulatory region sequencing) a method to assay enhancer activity for millions of candidates from arbitrary sources of DNA.
biological databaseBiological databases are libraries of biological sciences, collected from scientific experiments, published literature, high-throughput experiment technology, and computational analysis.
bioinformaticsnoun(biology, computer science) A field of science in which biology, computer science, and information technology merge into a single discipline to analyse biological information using computers and statistical techniques.

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